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Table 2 Q-MSP primer and TaqMan probe sequences used in this study

From: Analysis of BRAFV600E mutation and DNA methylation improves the diagnostics of thyroid fine needle aspiration biopsies

Genes

Forward primer sequences (5′ → 3′)

Probe sequence

Reverse primer sequence (5′ → 3′)

CALCA

GTTTTGGAAGTATGAGGGTGACG

6FAM-ATTCCGCCAATACACAACAACCAATAAACG-TAMRA

TTCCCGCCGCTATAAATCG

DAPK1

GGATAGTCGGATCGAGTTAACGTC

6FAM-TTCGGTAATTCGTAGCGGTAGGGTTTGG-TAMRA

CCCTCCCAAACGCCGA

TIMP3

GCGTCGGAGGTTAAGGTTGTT

6FAM-AACTCGCTCGCCCGCCGAA-TAMRA

CTCTCCAAAATTACCGTACGCG

RAR-beta

GGGATTAGAATTTTTTATGCGAGTTGT

6FAM-TGTCGAGAACGCGAGCGATTCG-TAMRA

TACCCCGACGATACCCAAAC

RASSF1A

GCGTTGAAGTCGGGGTTC

6FAM-ACAAACGCGAACCGAACGAAACCA-TAMRA

CCCGTACTTCGCTAACTTTAAACG

β-actin

TGGTGATGGAGGAGGTTTAGTAAGT

6FAM-ACCACCACCCAACACACAATAACAAACACA-TAMR

AAACCAATAAAACCTACTCCTCCCTTAA