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Table 3 Helicobacteraceae DNA was detected by nested PCR in colonic biopsies

From: RETRACTED ARTICLE: Detection of Helicobacter spp. DNA in the colonic biopsies of stray dogs: molecular and histopathological investigations

Primera

Sequence (5' - 3')b

Product size (bp)

PCR conditions

Target sequence

Referencesc

H276f

CTA TGA CGG GTA TCC GGC

374

94°c for 15 min and 30 s,52°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

Helicobacter spp.16S rRNA

Riley et al. [17]

H676r

ATT CCA CCT ACC TCT CCC A

    

p17f

ATG GAA CAG ATA AAG ATT TTA AAG CAA CTT CAG

435

94°c for 15 min and 30 s,55°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

H. bilis specifict protein

Feng et al. [21]

p17r

CTA TGC AAG TTG TGC GTT AAG CAT

    

Fe1F

TTT GGT GCT CAC TAA CGC CCT C

434 (438)

94°c for 15 min and 30 s,52°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

H. felis urease gene

Baele et al. [19]

Fe3R

TTC AAT CTG ATC GCG TAA AG

    

Bi1F

AAC CAA Y AG CCC CAG CAG CC

373

94°c for 15 min and 30 s,54°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

H. bizzozeronii urease gene

Baele et al. [19]

Bi2R

TGG TTT TAA GGT TCC AGC GC

    

HSALF

CAT TTT CAA AGA GGG CTT GC

537

94°c for 15 min and 30 s,51°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

H. salomonis HSP60

Mikkonen et al. [20]

HSALR

GCA CAC CCC TCA GTT TGT TT

    

HP-FOR

TTA TCG GTA AAG ACA CCA GAA A

132

94°c for 15 min and 30 s,49°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

H. pylori urease C gene

He et al. [22]

HP-REV

ATC ACA GCG CAT GTC TTC

    

canis3Fd

TAA GCG CGG TAT GGA TAA GG

254

94°c for 15 min and 30 s,52°c for 30 s,72°c for 30 s, 35 cycles,72°c for 7 min

H. canis HSP60

EU233451

canis4Rd

TTA AGT AGC CGC GGT CAA AC

    
  1. a:Different Types of Primers, b:Sequence of Helicobacteraceae DNA, c:References studied for all the selected procedures, d:comparison between numerical continuous of the primer in the helicobacter canis.