Skip to main content

Table 5 Clinical specimen results for known KRAS, EGFR and BRAF mutations

From: Quality control material for the detection of somatic mutations in fixed clinical specimens by next-generation sequencing

 

KRAS or EGFR or BRAF Mutation Status

Sample_ID

Single-Gene Assay

CHP2 Assay

DNA_01

EGFR c.2369C > T (p.Thr790Met)

EGFR c.2369C > T (p.Thr790Met)

DNA_02

EGFR c.2156G > C p.Gly719Ala

EGFR c.2156G > C p.Gly719Ala

DNA_03

Negative

Negative

DNA_04

Negative

Negative

DNA_05

EGFR Exon 20 INS

EGFR c.2307_2308ins9 (p.V769_D770insASV)

DNA_06

Negative

Negative

DNA_07

Negative

Negative

DNA_08

EGFR c.2369C > T (p.Thr790Met)

EGFR c.2369C > T (p.Thr790Met)

DNA_09

EGFR c.2369C > T (p.Thr790Met)

EGFR c.2369C > T (p.Thr790Met)

DNA_10

EGFR Exon 19 DEL

EGFR c.2236_2250del15 (p.E746_A750delELREA)

DNA_11

Negative

Negative

DNA_12

Negative

Negative

DNA_13

Negative

Negative

DNA_14

Negative

Negative

DNA_15

Negative

Negative

DNA_16

Negative

Negative

DNA_17

Negative

Negative

DNA_18

Negative

Negative

DNA_19

Negative

Negative

DNA_20

Negative

Negative

DNA_21

KRAS c.35G > T (p.Gly12Val)

KRAS c.35G > T (p.Gly12Val)

DNA_22

Negative

Negative

DNA_23

EGFR c.2582 T > A (p.Leu861Gln)

EGFR c.2582 T > A (p.Leu861Gln)

DNA_24

EGFR c.2582 T > A (p.Leu861Gln)

EGFR c.2582 T > A (p.Leu861Gln)

DNA_25

Negative

Negative

DNA_26

BRAF c.1799 T > A (p.Val600Glu)

BRAF c.1799 T > A (p.Val600Glu)

DNA_27

KRAS c.34G > A (p.Gly12Ser)

c.34G > A (p.Gly12Ser)

DNA_28

Negative

Negative

DNA_29

EGFR c.2155G > A (p.Gly719Ser)

EGFR c.2155G > A (p.Gly719Ser)

DNA_30

Negative

Negative

DNA_31

Negative

Negative

DNA_32

KRAS c.34G > T (p.Gly12Cys)

c.34G > T (p.Gly12Cys)

DNA_33

BRAF c.1798_1799delGTinsAA (p.Val600Lys)

BRAF c.1798_1799delGTinsAA (p.Val600Lys)

DNA_34

BRAF c.1798_1799delGTinsAA (p.Val600Lys)

BRAF c.1798_1799delGTinsAA (p.Val600Lys)

DNA_35

EGFR Exon 19 DEL

EGFR c.2235_2246del12 (p.Glu746_Glu749del)

DNA_36

Negative

Negative

DNA_37

EGFR c.2573 T > G (p.Leu858Arg)

EGFR c.2573 T > G (p.Leu858Arg)

DNA_38

EGFR c.2573 T > G (p.Leu858Arg)

EGFR c.2573 T > G (p.Leu858Arg)

DNA_39

KRAS c.34G > T (p.Gly12Cys)

c.34G > T (p.Gly12Cys)

DNA_40

Negative

Negative

DNA_41

KRAS c.38G > A (p.Gly13Asp)

c.38G > A (p.Gly13Asp)

DNA_42

KRAS c.38G > A (p.Gly13Asp)

c.38G > A (p.Gly13Asp)

DNA_43

EGFR c.2573 T > G (p.Leu858Arg)

Negative

DNA_44

EGFR Exon 20 INS

c.2312_2314dupACC (p.Pro772delinsHisPro)

DNA_45

Negative

Negative

DNA_46

Negative

Negative

DNA_47

KRAS c.35G > T (p.Gly12Val)

c.35G > T (p.Gly12Val)

DNA_48

Negative

Negative

DNA_49

Negative

Negative

DNA_50

BRAF c.1799 T > A (p.V600Glu)

c.1799 T > A (p.V600Glu)

DNA_51

KRAS c.35G > A (p.Gly12Asp)

c.35G > A (p.Gly12Asp)

DNA_52

BRAF c.1799 T > A (p.Val600Glu)

BRAF c.1799 T > A (p.Val600Glu)

DNA_53

KRAS c.35G > T (p.Gly12Val)

KRAS c.35G > T (p.Gly12Val)

DNA_54

EGFR c.2573 T > G (p.Leu858Arg)

EGFR c.2573 T > G (p.Leu858Arg)

DNA_55

BRAF c.1799 T > A (p.Val600Glu)

BRAF c.1799 T > A (p.Val600Glu)