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Table 1 HPV genotyping by NGS of 26 cervical samples LA HPV84+

From: Cross-hybridization between HPV genotypes in the Linear Array Genotyping Test confirmed by Next-Generation Sequencing

Sample Number

Linear Array

NGS

S1

39, 51, 56, 58, 62, 84

39, 51, 58, 62, 84

S2

45, 59, 66, 73, 84, 89

45, 59, 66, 73, 89, 114

S3

6, 53, 61, 84, 89

6, 53, 61, 84, 89

S4

16, 42, 45, 54, 84

16, 69, 84

S5

31, 56, 66, 82, 84

56, 84

S6

58, 81, 82, 84, 89

16, 44, 53, 58, 66, 72, 81, 82, 84, 89

S7

11, 42, 61, 84

11, 61, 114

S8

16, 51, 54, 84

16, 54, 84

S9

16, 53, 83, 84

16, 53, 62, 83, 114

S10

16, 61, 84, 89

16, 61, 83, 84, 89

S11

35, 66, 84, 89

32, 35, 66, 84, 89

S12

39, 54, 61, 84

39, 51, 54, 58, 61, 62, 84, 87, 106, 114

S13

39, 61, 84, 89

61, 89, 87, 114

S14

56, 66, 70, 84

16, 66, 70, 87, 114

S15

69, 71, 81, 84

69, 71, 81, 114

S16

11, 39, 84

11, 39, 114

S17

45, 62, 84

45, 62, 84

S18

56, 61, 84

6, 56, 61, 68, 84

S19

16, 84

16, 70, 81, 83, 86

S20

18, 84

18, 84

S21

31, 84

31, 83, 84

S22

31, 84

31, 54, 84

S23

45, 84

45, 84

S24

45, 84

45, 66, 84

S25

59, 84

59, 84

S26

66, 84

66, 84

  1. The first column shows LA results and the second column NGS results. HPV84, 86, 87 and 114 are darkened for an easier visualization
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Diagnostic Pathology

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