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Table 2 Primer sequences

From: An economical Nanopore sequencing assay for human papillomavirus (HPV) genotyping

Primer

5′ to 3′ sequence

References

PGMY PCR

 PGMY11-A

GCA CAG GGA CAT AAC AAT GG

[13]

 PGMY11-B

GCG CAG GGC CAC AAT AAT GG

 PGMY11-C

GCA CAG GGA CAT AAT AAT GG

 PGMY11-D

GCC CAG GGC CAC AAC AAT GG

 PGMY11-E

GCT CAG GGT TTA AAC AAT GG

 PGMY09-F

CGT CCC AAA GGA AAC TGA TC

 PGMY09-G

CGA CCT AAA GGA AAC TGA TC

 PGMY09-H

CGT CCA AAA GGA AAC TGA TC

 PGMY09-I

G CCA AGG GGA AAC TGA TC

 PGMY09-J

CGT CCC AAA GGA TAC TGA TC

 PGMY09-K

CGT CCA AGG GGA TAC TGA TC

 PGMY09-L

CGA CCT AAA GGG AAT TGA TC

 PGMY09-M

CGA CCT AGT GGA AAT TGA TC

 PGMY09-N

CGA CCA AGG GGA TAT TGA TC

 PGMY09-P

G CCC AAC GGA AAC TGA TC

 PGMY09-Q

CGA CCC AAG GGA AAC TGG TC

 PGMY09-R

CGT CCT AAA GGA AAC TGG TC

 HMB01

GCG ACC CAA TGC AAA TTG GT

 Human β-globin forward

GAAGAGCCAAGGACAGGTAC

[15]

 Human β-globin reverse

GGAAAATAGACCAATAGGCAG

MGP PCR

 MGPA

ACGTTGGATGTTTGTTACTGTGGTGGATACTAC

[16]

 MGPB

ACGTTGGATGTTTGTTACCGTTGTTGATACTAC

 MGPC

ACGTTGGATGTTTGTTACTAAGGTAGATACCACTC

 MGPD

ACGTTGGATGTTTGTTACTGTTGTGGATACAAC

 MGP31

ACGTTGGATGTTTGTTACTATGGTAGATACCACAC

 MGPG

ACGTTGGATGGAAAAATAAACTGTAAATCATATTCCT

 MGPH

ACGTTGGATGGAAAAATAAATTGTAAATCATACTC

 MGPI

ACGTTGGATGGAAATATAAATTGTAAATCAAATTC

 MGPJ

ACGTTGGATGGAAAAATAAACTGTAAATCATATTC

 MGP18

ACGTTGGATGGAAAAATAAACTGCAAATCATATTC