From: An economical Nanopore sequencing assay for human papillomavirus (HPV) genotyping
Primer | 5′ to 3′ sequence | References |
---|---|---|
PGMY PCR | ||
PGMY11-A | GCA CAG GGA CAT AAC AAT GG | [13] |
PGMY11-B | GCG CAG GGC CAC AAT AAT GG | |
PGMY11-C | GCA CAG GGA CAT AAT AAT GG | |
PGMY11-D | GCC CAG GGC CAC AAC AAT GG | |
PGMY11-E | GCT CAG GGT TTA AAC AAT GG | |
PGMY09-F | CGT CCC AAA GGA AAC TGA TC | |
PGMY09-G | CGA CCT AAA GGA AAC TGA TC | |
PGMY09-H | CGT CCA AAA GGA AAC TGA TC | |
PGMY09-I | G CCA AGG GGA AAC TGA TC | |
PGMY09-J | CGT CCC AAA GGA TAC TGA TC | |
PGMY09-K | CGT CCA AGG GGA TAC TGA TC | |
PGMY09-L | CGA CCT AAA GGG AAT TGA TC | |
PGMY09-M | CGA CCT AGT GGA AAT TGA TC | |
PGMY09-N | CGA CCA AGG GGA TAT TGA TC | |
PGMY09-P | G CCC AAC GGA AAC TGA TC | |
PGMY09-Q | CGA CCC AAG GGA AAC TGG TC | |
PGMY09-R | CGT CCT AAA GGA AAC TGG TC | |
HMB01 | GCG ACC CAA TGC AAA TTG GT | |
Human β-globin forward | GAAGAGCCAAGGACAGGTAC | [15] |
Human β-globin reverse | GGAAAATAGACCAATAGGCAG | |
MGP PCR | ||
MGPA | ACGTTGGATGTTTGTTACTGTGGTGGATACTAC | [16] |
MGPB | ACGTTGGATGTTTGTTACCGTTGTTGATACTAC | |
MGPC | ACGTTGGATGTTTGTTACTAAGGTAGATACCACTC | |
MGPD | ACGTTGGATGTTTGTTACTGTTGTGGATACAAC | |
MGP31 | ACGTTGGATGTTTGTTACTATGGTAGATACCACAC | |
MGPG | ACGTTGGATGGAAAAATAAACTGTAAATCATATTCCT | |
MGPH | ACGTTGGATGGAAAAATAAATTGTAAATCATACTC | |
MGPI | ACGTTGGATGGAAATATAAATTGTAAATCAAATTC | |
MGPJ | ACGTTGGATGGAAAAATAAACTGTAAATCATATTC | |
MGP18 | ACGTTGGATGGAAAAATAAACTGCAAATCATATTC |