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Table 1 Frequencies of methylation of analyzed genes in PB and breast tumors.

From: Methylation of cancer related genes in tumor and peripheral blood DNA from the same breast cancer patient as two independent events

GENE

Chromosomal region targeted by assay *

Number of paired samples used/excluded**

Methylated in both blood and tumor

Sample no. (%)

Methylated only tumor***

Methylated only PBL

Sample no. (%)

BRCA1

chr17:41, 277, 382-41, 277, 409

75/6

3 (4.3%)

23%

3 (4.3%)

APC

chr5:112, 073, 470-112, 073, 516

75/3

3 (4.1%)

83%

2 (2.7%)

RASSF1A

chr3:50, 377, 755-50, 378, 089

75/2

0%

97%

0

  1. * UCSC Genome Browser on Human Feb. 2009 (GRCh37/hg19) Assembly
  2. ** Samples excluded due to failure of PCR amplification
  3. *** Out of all tumor samples used