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Table 3 Cases with positive FISH

From: “Evaluation of ROS1 expression and rearrangements in a large cohort of early-stage lung cancer”

Case

FISH

signals (%)

IHC H-score TMA/Fullslide

IHC heterogeneity

DNA-NGS

RNA-NGS

Histology

pStage

Age/

sex

Smoking status/

Pack-year

D4D6

SP384

1

39

240/300

300/300

No

TP53

AKT2 CNV

ROS1-CD74

Adenocarcinoma (mucinous component)

IIb

75.1/male

Former smoker/12.3

2

28

0/0

0/0

No

Fail

Fail

Squamous carcinoma

IIIa

69.4/male

Former smoker/34.5

3

16

0/0

0/0

No

Fail

Negative

Adenosquamous

IIb

58.1/female

Current smoker/55

4

64

300/300

300/300

No

SETD2, TSC2, TP53

ROS1-CD74

Adenocarcinoma (Solid)

IIIa

61.6/female

Never smoker/0

5

53

200/300

200/300

No

PTCH1, TP53

ROS1-CD74

Adenocarcinom (mucinous component)

IIb

61.7/female

Current smoker/23.5

  1. In the column FISH signals we report the sum of the isolated 3`signal, isolated 5`signal and split signals divided on the total number of signals (the equation is described under Methods and in Additional file 1)