Table 1 Top 20 biomarkers in the GEP-HN-LS test classification algorithm
From: A gene expression profile test to resolve head & neck squamous versus lung squamous cancers
Marker rank | Probeset ID | Gene symbol | Gene name | Tissue type with higher expression levels |
|---|---|---|---|---|
1 | 218835_at* | SFTPA2 | surfactant protein A2 | Lung |
2 | 209810_at* | SFTPB | surfactant protein B | Lung |
3 | 37004_at* | SFTPB | surfactant protein B | Lung |
4 | 214387_x_at* | SFTPC | surfactant protein C | Lung |
5 | 211735_x_at* | SFTPC | surfactant protein C | Lung |
6 | 211024_s_at* | NKX2-1 | NK2 homeobox 1 (TTF-1) | Lung |
7 | 205927_s_at | CTSE | cathepsin E | Lung |
8 | 205654_at | C4BPA | complement component 4 binding protein, alpha | Lung |
9 | 209351_at | KRT14 | keratin 14 | Head & Neck |
10 | 205916_at | S100A7 | S100 calcium binding protein A7 | Head & Neck |
11 | 205778_at | KLK7 | kallikrein-related peptidase 7 | Head & Neck |
12 | 211538_s_at | HSPA2 | heat shock 70Â kDa protein 2 | Head & Neck |
13 | 206697_s_at | HP | haptoglobin | Lung |
14 | 209616_s_at | CES1 | carboxylesterase 1 | Lung |
15 | 211429_s_at | SERPINA1 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 | Lung |
16 | 213553_x_at | APOC1 | apolipoprotein C-I | Lung |
17 | 204424_s_at | LMO3 | LIM domain only 3 (rhombotin-like 2) | Lung |
18 | 206008_at | TGM1 | transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase) | Head & Neck |
19 | 218644_at | PLEK2 | pleckstrin 2 | Head & Neck |
20 | 202017_at | EPHX1 | epoxide hydrolase 1, microsomal (xenobiotic) | Lung |