Table 1 Primers and LNA probes for LNA assay with Sanger sequencing confirmation

18

18 FP

G719A/S/C

112 bp

CAGGAAACAGCTATGACCTGGAGCCTCTTACACCCAGT

18 RP

ACCGTGCCGAACGCACCGGA

18 LNA

GAGCCCAGC

19

19 FP

Deletions

176 bp

GTTAAAATTCCCGTCGCTATCA

19 RP

TGTAAAACGACGGCCAGTTGTGGAGATGAGCAGGGTCT

19 LNA

CAAGGAATTAAGA

20

20 FP

Insertions

161 bp

GAAGCCTACGTGATGGCCA

20 RP

CAGGAAACAGCTATGACCAGCAGGTACTGGGAGCCAAT

20 LNA

CAGCGTGGACA

-

M13-tag 1

For Sanger sequencing

-

TGTAAAACGACGGCCAGT

-

M13-tag 2

For Sanger sequencing

-

CAGGAAACAGCTATGACC