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Table 7 p53 immunohistochemical staining pattern and TP53 mutation discordant cases

From: p53 immunostaining pattern is a useful surrogate marker for TP53 gene mutations

 

Primary Site

Diagnosis

P53 IHC

TP53 mutation type

Class

alteration

allele frquency

cbioportal

MDM2 amplification

Neoadjuvant treatment

group 1

Large intestine

Adenocarcinoma

NT

WT

WT

ND

 

negative

Not amplified

Done

Large intestine

Adenocarcinoma

NT

WT

WT

ND

 

negative

Not amplified

Done

Large intestine

Adenocarcinoma

NT

WT

WT

ND

 

negative

Not amplified

 

Large intestine

Adenocarcinoma

OE

WT

WT

ND

 

negative

Not amplified

 

Large intestine

Mucinous adenocarcinoma

OE

WT

WT

ND

 

negative

Not amplified

Done

Large intestine

Adenocarcinoma

OE

WT

WT

ND

 

negative

Not amplified

 

Large intestine

Adenocarcinoma

OE

WT

WT

ND

 

negative

Not amplified

Done

Anus

Adenocarcinoma

OE

WT

WT

ND

 

negative

Not amplified

Done

Ovary

Papillary serous carcinoma

OE

WT

WT

ND

 

negative

Not amplified

Done

Brain

Glioblastoma

OE

WT

WT

ND

 

negative

Amplified

 

group 2

Large intestine

Adenocarcinoma

OE

truncation

LOF

R342*

0.23

Likely oncogenic

Not amplified

 

Large intestine

Adenocarcinoma

OE

splice site

LOF

X126_splice

0.33

Likely oncogenic

Not amplified

Done

Large intestine

Adenocarcinoma

OE

CNV loss

LOF

loss

0

unknown

Not amplified

 

Large intestine

Adenocarcinoma

OE

splice site

LOF

X261_splice

0.31

Likely oncogenic

Not amplified

 
  1. ND Not detected, NT Null type, OE Overexpression, WT Wild type