Skip to main content

Table 1 Staining protocol used in Experiments 1 and 2

From: Quantitative assessment of H&E staining for pathology: development and clinical evaluation of a novel system

Process

Step

Solution

Duration (m:s)

 

Process

Step

Solution

Duration (m:s)

Dewaxing

1

Xylene (wash 1)

3:00

 

Staining

14

Running tap water

1:00

2

Xylene (wash 2)

3:00

 

15

Scott’s Tap Water

2:00

3

Xylene (wash 3)

3:00

 

16

Running tap water

1:00

4

Xylene (wash 4)

3:00

 

17

Aqueous Eosin Y (1%)

0:15 − 6:00 (see

SI Table 2)

Rehydration

5

100% ethanol (wash 1)

3:00

 

18

Running tap water

1:00

6

100% ethanol (wash 2)

3:00

 

Dehydration

19

100% ethanol (wash 1)

0:30

7

100% ethanol (wash 3)

3:00

 

20

100% ethanol (wash 2)

1:00

8

100% ethanol (wash 4)

3:00

 

21

100% ethanol

(wash 3)

5:00

9

75% ethanol

3:00

 

22

100% ethanol (wash 4)

5:00

10

50% ethanol

3:00

 

Clearing

23

Xylene (wash 1)

3:00

11

25% ethanol

1:00

 

24

Xylene (wash 2)

3:00

12

Running tap water

2:00

 

25

Xylene (wash 3)

3:00

Staining

13

Mayer’s Haematoxylin

0:15 − 6:00 (see SI Table 2)

 

Mounting

26

DPX mountant

-

  1. The staining protocol used in Experiment 1 and 2 is described, outlining process, solution and duration used. All steps in this protocol were undertaken at room temperature. Please note stain technique 1 (haematoxylin only) excluded steps 17–18, and stain technique 2 (eosin only) excluded steps 13–16. Stain technique 3 included all steps. Abbreviations: m:s, minutes : seconds; SI, Supplementary Information; DPX, Dibutylphthalate Polystyrene Xylene